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  • Top cofit genes for PS417_17125 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: FIG033889: YebC paralog in Betaproteobacteria

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04290 hypothetical protein no 0.39
    2 PS417_24500 DEAD/DEAH box helicase no 0.37
    3 PS417_19825 ATPase AAA 0.28 0.35
    4 PS417_24335 50S rRNA methyltransferase no 0.34
    5 PS417_01405 sugar transporter no 0.34
    6 PS417_05400 hypothetical protein no 0.34
    7 PS417_21630 magnesium transporter 0.17 0.33
    8 PS417_01415 glycosyl transferase family 1 no 0.33
    9 PS417_01410 transporter no 0.33
    10 PS417_12350 cobalamin biosynthesis protein CobN no 0.33
    11 PS417_01395 biofilm formation protein PelB no 0.33
    12 PS417_22445 ATP-dependent DNA helicase RuvB 0.59 0.32
    13 PS417_26370 RNA helicase no 0.32
    14 PS417_00040 ATPase no 0.32
    15 PS417_20785 transcriptional regulator 0.33 0.32
    16 PS417_19830 flagellar assembly protein FliT no 0.31
    17 PS417_00025 transcriptional regulator no 0.31
    18 PS417_01420 histidine kinase no 0.30
    19 PS417_02560 23S rRNA methyltransferase no 0.30
    20 PS417_17065 catalase no 0.30

    Or look for negative cofitness