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  • Top cofit genes for GFF3346 from Sphingobium sp. HT1-2

    RidA/YER057c/UK114 superfamily, group 1
    SEED: Endoribonuclease L-PSP

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5056 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.58 0.86
    2 GFF528 Muconate cycloisomerase (EC 5.5.1.1) no 0.84
    3 GFF754 Carboxyl-terminal protease (EC 3.4.21.102) 0.11 0.82
    4 GFF4971 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) no 0.82
    5 GFF180 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) no 0.81
    6 GFF526 benzoate MFS transporter BenK no 0.81
    7 GFF3517 General secretion pathway protein F 0.58 0.80
    8 GFF3067 hypothetical protein no 0.79
    9 GFF3176 Na+/H+ antiporter no 0.79
    10 GFF2573 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.51 0.79
    11 GFF2338 hypothetical protein no 0.79
    12 GFF941 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.56 0.78
    13 GFF3645 Transcriptional regulator, Xre family no 0.78
    14 GFF4546 hypothetical protein no 0.78
    15 GFF5376 hypothetical protein no 0.78
    16 GFF4592 Bacteriophage protein gp37 no 0.78
    17 GFF2749 Hybrid sensory histidine kinase no 0.78
    18 GFF764 hypothetical protein 0.72 0.77
    19 GFF3420 Acetyltransferase no 0.77
    20 GFF2143 UPF0118 membrane protein SMc00793 no 0.76

    Or look for negative cofitness