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  • Top cofit genes for GFF334 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) no 0.55
    2 GFF1128 Alkyl hydroperoxide reductase subunit C-like protein no 0.55
    3 GFF296 Septum formation protein Maf no 0.55
    4 GFF4249 hypothetical protein no 0.54
    5 GFF5402 Transcriptional regulator, IclR family no 0.54
    6 GFF3191 no description no 0.53
    7 GFF794 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.52
    8 GFF5293 N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87) no 0.52
    9 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.52
    10 GFF3795 Flagellar hook-length control protein FliK no 0.52
    11 GFF1419 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) no 0.51
    12 GFF3542 hypothetical protein no 0.50
    13 GFF6412 Histidine ABC transporter, permease protein no 0.50
    14 GFF5441 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein no 0.49
    15 GFF4691 Cobalt/zinc/cadmium resistance protein CzcD no 0.49
    16 GFF3759 Uridine kinase family protein YggC homolog no 0.48
    17 GFF5234 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) no 0.47
    18 GFF3137 hypothetical protein no 0.46
    19 GFF2268 Protein of unknown function DUF1428 no 0.46
    20 GFF1124 no description no 0.46

    Or look for negative cofitness