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  • Top cofit genes for PS417_17085 from Pseudomonas simiae WCS417

    fimbrial assembly protein
    SEED: Sigma-fimbriae usher protein
    KEGG: outer membrane usher protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00280 radical SAM protein 0.28 0.31
    2 PS417_03095 ATPase no 0.31
    3 PS417_05980 chemotaxis protein CheA 0.29 0.29
    4 PS417_03050 hypothetical protein no 0.28
    5 PS417_14040 alkyl hydroperoxide reductase 0.53 0.27
    6 PS417_03090 type II secretion system protein F 0.24 0.27
    7 PS417_03065 peptidase A24 no 0.26
    8 PS417_05970 chemotaxis protein CheR 0.26 0.25
    9 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA no 0.25
    10 PS417_17105 spore coat protein no 0.25
    11 PS417_10265 peptidase no 0.25
    12 PS417_03070 LuxR family transcriptional regulator 0.35 0.24
    13 PS417_09640 capsular biosynthesis protein 0.56 0.24
    14 PS417_14745 hypothetical protein no 0.24
    15 PS417_07615 TetR family transcriptional regulator no 0.24
    16 PS417_02820 urea ABC transporter ATP-binding protein no 0.23
    17 PS417_27075 thiol-disulfide isomerase no 0.23
    18 PS417_27800 exodeoxyribonuclease III 0.43 0.23
    19 PS417_01215 membrane protein no 0.23
    20 PS417_07710 membrane protein 0.77 0.23

    Or look for negative cofitness