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  • Top cofit genes for PS417_17080 from Pseudomonas simiae WCS417

    lipoprotein
    SEED: Sigma-fimbriae tip adhesin

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24155 ATP-binding protein no 0.31
    2 PS417_20985 porin no 0.30
    3 PS417_23770 exodeoxyribonuclease V subunit alpha no 0.27
    4 PS417_00280 radical SAM protein no 0.27
    5 PS417_02415 phosphoserine phosphatase 0.42 0.25
    6 PS417_01570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase no 0.24
    7 PS417_14940 LysR family transcriptional regulator no 0.24
    8 PS417_00185 tryptophan synthase subunit beta no 0.24
    9 PS417_00180 tryptophan synthase subunit alpha no 0.23
    10 PS417_27035 FAD-linked oxidase no 0.23
    11 PS417_04180 GntR family transcriptional regulator no 0.23
    12 PS417_27875 histidine kinase no 0.23
    13 PS417_28260 VdlD no 0.23
    14 PS417_07225 molybdenum ABC transporter substrate-binding protein no 0.23
    15 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase no 0.22
    16 PS417_14710 isochorismatase no 0.22
    17 PS417_22855 ssDNA exonuclease RecJ 0.24 0.22
    18 PS417_16875 signal peptidase no 0.22
    19 PS417_27010 threonine dehydratase no 0.22
    20 PS417_12290 sulfite reductase no 0.22

    Or look for negative cofitness