Top cofit genes for GFF3337 from Variovorax sp. SCN45

16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170)
SEED: rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
KEGG: ribosomal RNA small subunit methyltransferase G

Rank Hit Name Description Conserved? Cofitness  
1 GFF6247 ApaG protein 0.76 0.60
2 GFF2342 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.58
3 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) 0.64 0.57
4 GFF1342 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) no 0.55
5 GFF2202 hypothetical protein no 0.55
6 GFF4095 no description no 0.53
7 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.58 0.53
8 GFF7271 Transcriptional regulator, LacI family no 0.53
9 GFF2343 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.52
10 GFF5403 no description no 0.51
11 GFF345 hypothetical protein no 0.51
12 GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no 0.50
13 GFF5384 Proteins containing SET domain no 0.50
14 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.49
15 GFF2811 Transcriptional regulator, YafY family no 0.49
16 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 0.48
17 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.47 0.47
18 GFF2720 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.47
19 GFF7411 no description no 0.47
20 GFF5924 FOG: HEAT repeat no 0.47

Or look for negative cofitness