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  • Top cofit genes for PS417_17070 from Pseudomonas simiae WCS417

    RNA polymerase subunit sigma-24
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05790 hypothetical protein 0.41 0.26
    2 PS417_03025 penicillin-binding protein 1C no 0.21
    3 PS417_22780 XRE family transcriptional regulator no 0.20
    4 PS417_07165 dihydrodipicolinate synthase no 0.19
    5 PS417_13870 hypothetical protein no 0.19
    6 PS417_02125 cobalamin biosynthesis protein CobQ no 0.19
    7 PS417_06735 3-oxoadipate enol-lactonase no 0.19
    8 PS417_05695 transcriptional regulator no 0.19
    9 PS417_05785 tail protein no 0.19
    10 PS417_05885 potassium transporter Kup 0.24 0.19
    11 PS417_07585 hypothetical protein no 0.19
    12 PS417_01590 polysaccharide deacetylase no 0.19
    13 PS417_03015 hypothetical protein no 0.18
    14 PS417_22775 histidine kinase no 0.18
    15 PS417_05780 hypothetical protein no 0.18
    16 PS417_10765 hypothetical protein no 0.18
    17 PS417_10205 hypothetical protein no 0.18
    18 PS417_12180 ABC transporter substrate-binding protein 0.49 0.18
    19 PS417_24355 MFS transporter no 0.18
    20 PS417_01790 glucan biosynthesis protein G no 0.17

    Or look for negative cofitness