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  • Top cofit genes for GFF3329 from Variovorax sp. SCN45

    Terpene utilization protein AtuA
    SEED: 3-hydroxy-3isohexenylglutaryl-CoA:acetate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3741 Uncharacterized MFS-type transporter no 0.58
    2 GFF4648 Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system no 0.52
    3 GFF6157 Carbon monoxide oxidation accessory protein CoxD no 0.52
    4 GFF3576 no description no 0.50
    5 GFF6131 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    6 GFF1947 no description no 0.50
    7 GFF4402 Mobile element protein no 0.50
    8 GFF4670 Transcriptional regulator, AcrR family no 0.50
    9 GFF1922 Acyl-CoA dehydrogenase no 0.49
    10 GFF664 no description no 0.49
    11 GFF3361 Hydrolase no 0.49
    12 GFF3169 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.49
    13 GFF5290 hypothetical protein no 0.48
    14 GFF510 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    15 GFF6504 no description no 0.46
    16 GFF5935 VgrG protein no 0.46
    17 GFF1136 hypothetical protein no 0.45
    18 GFF6827 Glutamine amidotransferase, class I no 0.45
    19 GFF3352 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.45
    20 GFF6603 Glycosidases no 0.45

    Or look for negative cofitness