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  • Top cofit genes for PS417_17015 from Pseudomonas simiae WCS417

    Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data)
    Original annotation: isovaleryl-CoA dehydrogenase
    SEED: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
    KEGG: isovaleryl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24765 membrane protein no 0.36
    2 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.97 0.36
    3 PS417_24100 transcriptional regulator PdhR no 0.33
    4 PS417_04070 porin no 0.32
    5 PS417_17545 2-oxoisovalerate dehydrogenase 0.96 0.29
    6 PS417_17565 branched-chain amino acid aminotransferase 0.55 0.28
    7 PS417_04075 peptide ABC transporter substrate-binding protein 0.31 0.26
    8 PS417_21210 amidotransferase 0.58 0.25
    9 PS417_04060 dipeptide ABC transporter, permease component (from data) 0.90 0.25
    10 PS417_04055 peptide transporter 0.89 0.24
    11 PS417_16570 isocitrate lyase 0.90 0.23
    12 PS417_01950 malate dehydrogenase 0.29 0.23
    13 PS417_06605 leucine/isoleucine/valine transporter permease subunit 0.98 0.23
    14 PS417_26005 biotin synthase 0.57 0.23
    15 PS417_03335 MFS transporter 0.40 0.22
    16 PS417_23830 hypothetical protein 0.35 0.22
    17 PS417_18825 TetR family transcriptional regulator no 0.20
    18 PS417_09720 methyltransferase no 0.20
    19 PS417_23545 gamma-glutamyl kinase 0.60 0.20
    20 PS417_22500 porin no 0.20

    Or look for negative cofitness