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  • Top cofit genes for GFF3325 from Sphingobium sp. HT1-2

    YdcF-like protein
    SEED: FIG00450348: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4166 Ribosome hibernation promoting factor Hpf no 0.88
    2 GFF4096 Lipopolysaccharide biosynthesis protein no 0.86
    3 GFF2283 Quinone oxidoreductase (EC 1.6.5.5) no 0.83
    4 GFF788 Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) no 0.83
    5 GFF2781 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) no 0.83
    6 GFF2791 Two-component system sensor histidine kinase no 0.82
    7 GFF379 Tim44-like domain protein no 0.82
    8 GFF3760 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit no 0.82
    9 GFF366 NADH:ubiquinone oxidoreductase 17.2 kD subunit no 0.82
    10 GFF1149 Nitrogen regulation protein NtrB (EC 2.7.13.3) no 0.82
    11 GFF3462 Transcriptional regulator, LysR family no 0.82
    12 GFF2286 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.82
    13 GFF1150 tRNA-dihydrouridine synthase DusB no 0.81
    14 GFF1148 Nitrogen regulation protein NR(I), GlnG (=NtrC) no 0.81
    15 GFF4115 DNA-3-methyladenine glycosylase (EC 3.2.2.20) no 0.81
    16 GFF1678 Ferredoxin, 2Fe-2S no 0.81
    17 GFF776 RNA polymerase sigma-54 factor RpoN no 0.81
    18 GFF785 Ammonium transporter no 0.81
    19 GFF3473 ATP synthase protein I no 0.81
    20 GFF148 ATP-dependent protease subunit HslV (EC 3.4.25.2) no 0.81

    Or look for negative cofitness