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  • Top cofit genes for PS417_17010 from Pseudomonas simiae WCS417

    AMP-binding protein
    SEED: Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
    KEGG: fatty-acyl-CoA synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19635 lipid kinase 0.37 0.53
    2 PS417_03930 thymidine phosphorylase no 0.50
    3 PS417_20585 chemotaxis protein no 0.48
    4 PS417_19625 histidine kinase no 0.48
    5 PS417_07095 histidine kinase 0.56 0.46
    6 PS417_00630 nitrate ABC transporter substrate-binding protein 0.27 0.43
    7 PS417_19630 LuxR family transcriptional regulator 0.12 0.43
    8 PS417_02210 diguanylate cyclase no 0.42
    9 PS417_00625 taurine dioxygenase 0.28 0.40
    10 PS417_19615 chemotaxis protein CheW no 0.40
    11 PS417_18705 succinate dehydrogenase 0.24 0.38
    12 PS417_23580 peptidylprolyl isomerase no 0.37
    13 PS417_05985 chemotaxis protein CheY no 0.36
    14 PS417_22190 diguanylate cyclase no 0.36
    15 PS417_17000 MerR family transcriptional regulator 0.55 0.35
    16 PS417_24275 diguanylate phosphodiesterase no 0.34
    17 PS417_00635 sulfonate ABC transporter ATP-binding protein no 0.34
    18 PS417_19800 flagellar motor switch protein FliG 0.50 0.33
    19 PS417_19805 flagellar M-ring protein FliF 0.50 0.32
    20 PS417_24905 DNA-binding protein no 0.31

    Or look for negative cofitness