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  • Top cofit genes for PS417_17000 from Pseudomonas simiae WCS417

    MerR family transcriptional regulator
    SEED: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19635 lipid kinase no 0.45
    2 PS417_20585 chemotaxis protein no 0.40
    3 PS417_03930 thymidine phosphorylase no 0.37
    4 PS417_17010 AMP-binding protein 0.55 0.35
    5 PS417_19625 histidine kinase no 0.35
    6 PS417_19630 LuxR family transcriptional regulator no 0.33
    7 PS417_01015 polar amino acid ABC transporter permease no 0.32
    8 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.32
    9 PS417_20570 3-oxoacyl-ACP synthase 0.56 0.31
    10 PS417_07095 histidine kinase no 0.31
    11 PS417_02210 diguanylate cyclase 0.79 0.31
    12 PS417_21700 arginine N-succinyltransferase 0.64 0.29
    13 PS417_24275 diguanylate phosphodiesterase no 0.28
    14 PS417_05135 nucleoid-associated protein 0.28 0.28
    15 PS417_18705 succinate dehydrogenase no 0.28
    16 PS417_00080 potassium transporter peripheral membrane component 0.56 0.28
    17 PS417_05985 chemotaxis protein CheY 0.66 0.28
    18 PS417_21730 peptidase M14 no 0.28
    19 PS417_00625 taurine dioxygenase no 0.28
    20 PS417_16770 pyridine nucleotide-disulfide oxidoreductase no 0.27

    Or look for negative cofitness