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  • Top cofit genes for GFF3319 from Sphingobium sp. HT1-2

    TonB-dependent receptor
    SEED: Outer membrane receptor proteins, mostly Fe transport

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2247 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) no 0.84
    2 GFF3565 hypothetical protein no 0.80
    3 GFF4791 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) no 0.78
    4 GFF3739 Flagellar biosynthesis protein FliQ no 0.78
    5 GFF1261 Putative glycosyltransferase no 0.78
    6 GFF4256 hypothetical protein no 0.78
    7 GFF480 Methyl-accepting chemotaxis sensor/transducer protein no 0.77
    8 GFF1411 hypothetical protein no 0.76
    9 GFF431 hypothetical protein no 0.76
    10 GFF409 Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9) no 0.75
    11 GFF3513 General secretion pathway protein J no 0.75
    12 GFF4408 Mobile element protein no 0.74
    13 GFF5365 Putative transmembrane protein no 0.74
    14 GFF2225 TonB-dependent receptor no 0.74
    15 GFF4561 Transporter, LysE family no 0.74
    16 GFF4639 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.73
    17 GFF3787 RidA/YER057c/UK114 superfamily protein no 0.73
    18 GFF2257 hypothetical protein no 0.72
    19 GFF1328 hypothetical protein no 0.72
    20 GFF1837 Inner membrane transport protein YdhP no 0.72

    Or look for negative cofitness