Top cofit genes for GFF3316 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Inner membrane protein YcdZ
SEED: Inner membrane protein YcdZ

Rank Hit Name Description Conserved? Cofitness  
1 GFF121 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) no 0.59
2 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.56
3 GFF417 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) no 0.55
4 GFF55 [Protein-PII] uridylyltransferase (EC 2.7.7.59) no 0.55
5 GFF603 NfuA Fe-S protein maturation no 0.55
6 GFF110 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) no 0.54
7 GFF522 Low-affinity inorganic phosphate transporter 0.18 0.54
8 GFF2409 Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) no 0.53
9 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.24 0.53
10 GFF4353 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no 0.52
11 GFF387 Lipopolysaccharide core biosynthesis protein RfaZ no 0.51
12 GFF333 hypothetical protein no 0.51
13 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) no 0.51
14 GFF1059 ABC transporter, ATP-binding protein no 0.51
15 GFF2806 Transcriptional regulator for fatty acid degradation FadR, GntR family no 0.51
16 GFF379 Lipopolysaccharide heptosyltransferase III (EC 2.4.1.-) no 0.51
17 GFF619 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 0.20 0.51
18 GFF635 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) no 0.50
19 GFF20 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) no 0.50
20 GFF876 UPF0131 protein YtfP no 0.50

Or look for negative cofitness