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  • Top cofit genes for GFF3315 from Variovorax sp. SCN45

    Cu(I)-responsive transcriptional regulator
    SEED: Cu(I)-responsive transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2180 hypothetical protein 0.26 0.63
    2 GFF5310 Cytochrome c4 no 0.61
    3 GFF3724 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.57
    4 GFF2584 Sulfate permease no 0.57
    5 GFF5961 Acetyltransferase no 0.54
    6 GFF3723 Cytochrome c5 no 0.54
    7 GFF4921 hypothetical protein no 0.54
    8 GFF690 Transcriptional regulator, IclR family no 0.53
    9 GFF2398 Uncharacterized MFS-type transporter no 0.53
    10 GFF2178 Methyl-accepting chemotaxis sensor/transducer protein no 0.53
    11 GFF6076 Spermidine synthase-like protein no 0.52
    12 GFF1337 ABC transporter, substrate-binding protein RSc1750 no 0.52
    13 GFF7335 no description no 0.51
    14 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor 0.25 0.51
    15 GFF2304 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion no 0.50
    16 GFF6114 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.49
    17 GFF4443 Cytochrome c-type biogenesis protein ResA no 0.49
    18 GFF746 BUG/TctC family periplasmic protein 0.30 0.49
    19 GFF1013 hypothetical protein no 0.48
    20 GFF744 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 0.58 0.48

    Or look for negative cofitness