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Cofit
Protein
Homologs
Top cofit genes for PS417_16955 from
Pseudomonas simiae WCS417
pilus assembly protein
SEED: Pili assembly chaperone
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_06500
hypothetical protein
no
0.26
2
PS417
_22700
RNA polymerase subunit sigma-24
no
0.24
3
PS417
_22400
7-cyano-7-deazaguanine synthase
0.77
0.22
4
PS417
_14745
hypothetical protein
no
0.22
5
PS417
_15075
NAD-glutamate dehydrogenase
0.60
0.22
6
PS417
_14480
glycogen synthase
0.20
0.21
7
PS417
_00665
RND transporter
no
0.21
8
PS417
_18355
DNA-binding protein
0.29
0.21
9
PS417
_04495
LITAF-like zinc ribbon domain containing protein
no
0.21
10
PS417
_25045
hypothetical protein
no
0.20
11
PS417
_12955
sulfonate ABC transporter substrate-binding protein
no
0.20
12
PS417
_12560
MFS transporter
0.33
0.20
13
PS417
_03145
acetyl-CoA acetyltransferase
no
0.20
14
PS417
_10645
magnesium ABC transporter ATPase
no
0.19
15
PS417
_05080
LysR family transcriptional regulator
no
0.19
16
PS417
_25320
dTDP-4-dehydrorhamnose reductase
no
0.19
17
PS417
_22535
ornithine acetyltransferase
no
0.19
18
PS417
_28010
pyridine nucleotide-disulfide oxidoreductase
no
0.19
19
PS417
_16565
secretin
no
0.18
20
PS417
_05320
fimbria A protein
no
0.18
Or look for
negative cofitness