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  • Top cofit genes for PS417_16950 from Pseudomonas simiae WCS417

    fimbrial protein
    SEED: Major type 1 subunit fimbrin
    KEGG: major type 1 subunit fimbrin (pilin)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17665 ABC transporter permease no 0.23
    2 PS417_03930 thymidine phosphorylase no 0.20
    3 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.20
    4 PS417_00625 taurine dioxygenase no 0.19
    5 PS417_26050 response regulator no 0.19
    6 PS417_20585 chemotaxis protein no 0.18
    7 PS417_27225 protease no 0.18
    8 PS417_03040 hypothetical protein no 0.17
    9 PS417_19040 aspartate racemase no 0.17
    10 PS417_13040 TetR family transcriptional regulator no 0.17
    11 PS417_18905 acyl-CoA dehydrogenase no 0.16
    12 PS417_21215 3-hydroxyacyl-CoA dehydrogenase no 0.16
    13 PS417_11760 Fis family transcriptional regulator no 0.16
    14 PS417_19635 lipid kinase 0.20 0.15
    15 PS417_05160 DNA polymerase III subunit chi no 0.15
    16 PS417_13050 N-acetylglucosamine-6-sulfatase no 0.15
    17 PS417_19630 LuxR family transcriptional regulator 0.42 0.15
    18 PS417_13600 hypothetical protein no 0.15
    19 PS417_03130 hypothetical protein no 0.15
    20 PS417_21165 LysR family transcriptional regulator no 0.15

    Or look for negative cofitness