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  • Top cofit genes for PS417_16945 from Pseudomonas simiae WCS417

    LuxR family transcriptional regulator
    SEED: two component transcriptional regulator, LuxR family
    KEGG: two-component system, NarL family, captular synthesis response regulator RcsB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21560 flagellar basal body rod modification protein FlgD no 0.67
    2 PS417_21555 flagellar hook protein FlgE no 0.63
    3 PS417_19865 flagellar hook protein FlgK no 0.63
    4 PS417_19840 flagellar cap protein FliD no 0.62
    5 PS417_19785 flagellar biogenesis protein no 0.61
    6 PS417_19860 flagellar hook protein FlgL no 0.61
    7 PS417_19885 flagellar basal body rod protein FlgG no 0.61
    8 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA no 0.60
    9 PS417_19790 ATP synthase no 0.60
    10 PS417_19695 flagellar biosynthesis sigma factor 0.74 0.60
    11 PS417_19880 flagellar basal body L-ring protein no 0.60
    12 PS417_19710 flagellar biosynthesis protein FlhA no 0.60
    13 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.60
    14 PS417_19735 flagellar biosynthesis protein FliQ 0.22 0.59
    15 PS417_21595 flagellar biosynthesis protein FlgN no 0.59
    16 PS417_18000 hypothetical protein no 0.59
    17 PS417_21565 flagellar basal body rod protein FlgC no 0.59
    18 PS417_19725 flagellar biosynthesis protein FlhB no 0.59
    19 PS417_19835 flagellar biosynthesis protein FliS no 0.58
    20 PS417_19870 flagellar rod assembly protein FlgJ no 0.58

    Or look for negative cofitness