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  • Top cofit genes for PS417_01685 from Pseudomonas simiae WCS417

    membrane protein
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_14410 ABC transporter substrate-binding protein no 0.21
    2 PS417_10095 hypothetical protein no 0.18
    3 PS417_03195 LysR family transcriptional regulator no 0.18
    4 PS417_26405 diguanylate cyclase 0.33 0.17
    5 PS417_23670 Muconate cycloisomerase (EC 5.5.1.1) (from data) 0.81 0.17
    6 PS417_01670 Fe-S-oxidoreductase 0.20 0.16
    7 PS417_24855 integrase no 0.16
    8 PS417_08780 ion transporter no 0.16
    9 PS417_09740 RNA polymerase subunit sigma-24 0.20 0.16
    10 PS417_11995 RNA polymerase sigma factor no 0.16
    11 PS417_17650 proteinase no 0.15
    12 PS417_27600 HAD family hydrolase 0.20 0.15
    13 PS417_27440 delta-aminolevulinic acid dehydratase no 0.15
    14 PS417_09190 cysteine protease no 0.15
    15 PS417_03190 antibiotic biosynthesis monooxygenase no 0.15
    16 PS417_20335 hypothetical protein no 0.15
    17 PS417_07900 hypothetical protein no 0.15
    18 PS417_15355 sigma factor sigB regulation protein rsbQ no 0.15
    19 PS417_26125 glutathione S-transferase 0.22 0.15
    20 PS417_20745 twitching motility protein PilT no 0.14

    Or look for negative cofitness