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  • Top cofit genes for GFF331 from Variovorax sp. SCN45

    Nucleoside ABC transporter, permease protein 2
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: simple sugar transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6034 Replication-associated recombination protein RarA no 0.57
    2 GFF4846 Conjugative transfer protein TrbE no 0.53
    3 GFF2505 hypothetical protein no 0.53
    4 GFF3917 Ferrous iron transporter FeoB no 0.53
    5 GFF3247 FIG027190: Putative transmembrane protein no 0.52
    6 GFF5037 ABC transporter spermidine/putrescine-binding protein no 0.52
    7 GFF2802 DUF1176 domain-containing protein no 0.52
    8 GFF7204 no description no 0.52
    9 GFF3921 Tryptophan 2,3-dioxygenase (EC 1.13.11.11) no 0.50
    10 GFF531 hypothetical protein no 0.50
    11 GFF5429 Iron(III) dicitrate transport protein FecA no 0.50
    12 GFF4598 Efflux ABC transporter, permease/ATP-binding protein mlr7818 0.27 0.49
    13 GFF6698 ClpXP protease specificity-enhancing factor SspB no 0.49
    14 GFF5286 Ferrichrome-iron receptor no 0.49
    15 GFF972 no description no 0.47
    16 GFF5496 BUG/TctC family periplasmic protein no 0.47
    17 GFF3836 Cyclic beta-1,2-glucan synthase (EC 2.4.1.-) no 0.46
    18 GFF976 no description no 0.46
    19 GFF5147 Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17) no 0.46
    20 GFF5860 no description no 0.46

    Or look for negative cofitness