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  • Top cofit genes for PS417_16935 from Pseudomonas simiae WCS417

    diguanylate phosphodiesterase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09220 cupin 0.34 0.19
    2 PS417_08775 thiosulfate transporter subunit no 0.18
    3 PS417_08345 chemotaxis protein no 0.18
    4 PS417_04035 hypothetical protein no 0.18
    5 PS417_17780 Ais protein no 0.17
    6 PS417_03145 acetyl-CoA acetyltransferase no 0.17
    7 PS417_14935 transposase no 0.17
    8 PS417_24850 transcriptional regulator 0.15 0.17
    9 PS417_03040 hypothetical protein 0.14 0.17
    10 PS417_14915 host specificity protein 0.56 0.17
    11 PS417_25895 glyoxalase no 0.16
    12 PS417_07805 hypothetical protein no 0.16
    13 PS417_15990 GntR family transcriptional regulator no 0.16
    14 PS417_21630 magnesium transporter no 0.16
    15 PS417_11125 hypothetical protein no 0.16
    16 PS417_15415 membrane protein 0.34 0.16
    17 PS417_06810 hemolysin 0.19 0.15
    18 PS417_09340 spermidine/putrescine ABC transporter ATP-binding protein no 0.15
    19 PS417_14995 serine/threonine protein kinase no 0.15
    20 PS417_25015 fimbria A protein no 0.15

    Or look for negative cofitness