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  • Top cofit genes for GFF3309 from Variovorax sp. SCN45

    Beta-hexosaminidase (EC 3.2.1.52)
    SEED: Beta-hexosaminidase (EC 3.2.1.52)
    KEGG: beta-N-acetylhexosaminidase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6575 Conjugative transfer protein TrbJ no 0.73
    2 GFF5272 Various polyols ABC transporter, substrate-binding protein no 0.68
    3 GFF627 Secretion protein HlyD no 0.68
    4 GFF5053 Uncharacterized protein SPO0681 no 0.67
    5 GFF2711 hypothetical protein no 0.63
    6 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.62
    7 GFF4288 Acyl-CoA dehydrogenase no 0.60
    8 GFF2646 Acetyl-CoA acetyltransferase no 0.60
    9 GFF7416 DNA/RNA non-specific endonuclease no 0.59
    10 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.59
    11 GFF539 no description no 0.59
    12 GFF7037 Uncharacterized MFS-type transporter no 0.58
    13 GFF4345 hypothetical protein no 0.58
    14 GFF1012 Cystathionine beta-lyase (EC 4.4.1.8) no 0.58
    15 GFF3842 Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) no 0.57
    16 GFF5984 L-lactate dehydrogenase no 0.57
    17 GFF707 probable integral membrane protein NMA1898 no 0.56
    18 GFF4461 hypothetical protein no 0.56
    19 GFF2212 KEGG: prepilin peptidase CpaA no 0.55
    20 GFF1137 FIG00348850: hypothetical protein no 0.55

    Or look for negative cofitness