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Cofit
Protein
Homologs
Top cofit genes for GFF3300 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6208
Cytosine/purine/uracil/thiamine/allantoin permease family protein
no
0.58
2
GFF7340
ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.55
3
GFF2076
Alkyl sulfatase and related hydrolases, MBL-fold metallo-hydrolase superfamily
no
0.54
4
GFF3079
hypothetical protein
no
0.54
5
GFF5169
hypothetical protein
no
0.54
6
GFF5858
heme uptake regulator
no
0.53
7
GFF6049
Acyl-CoA dehydrogenase family protein
no
0.53
8
GFF4683
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
no
0.53
9
GFF4933
Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
no
0.53
10
GFF4655
SAM-dependent methyltransferase
no
0.51
11
GFF6693
Two-component transcriptional response regulator, LuxR family
no
0.50
12
GFF4433
1,6-anhydro-N-acetylmuramyl-L-alanine amidase
no
0.50
13
GFF2975
SAM-dependent methyltransferase
no
0.50
14
GFF3392
Transcriptional regulator, AraC family
no
0.49
15
GFF1083
no description
no
0.49
16
GFF3693
Oxidoreductase
no
0.49
17
GFF3945
Phosphate transport regulator (distant homolog of PhoU)
no
0.49
18
GFF5161
Glutathione S-transferase (EC 2.5.1.18)
no
0.49
19
GFF4716
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.48
20
GFF2088
Putative lipase in cluster with Phosphatidate cytidylyltransferase
no
0.48
Or look for
negative cofitness