Top cofit genes for GFF33 from Variovorax sp. SCN45

Type IV pilus biogenesis protein PilZ
SEED: Type IV pilus biogenesis protein PilZ
KEGG: type IV pilus assembly protein PilZ

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF5490		Uncharacterized protein with LysM domain, COG1652	0.98	0.99
2	GFF2510		Type IV fimbrial assembly, ATPase PilB	0.99	0.99
3	GFF5419		Type IV pilus biogenesis protein PilE	0.98	0.99
4	GFF5418		Type IV fimbrial biogenesis protein PilY1	no	0.99
5	GFF5321		Type IV pilus biogenesis protein PilO	0.97	0.99
6	GFF2508		Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)	0.97	0.99
7	GFF5414		hypothetical protein	no	0.99
8	GFF2509		Type IV fimbrial assembly protein PilC	0.99	0.99
9	GFF5323		Type IV pilus biogenesis protein PilQ	0.98	0.99
10	GFF5417		hypothetical protein	no	0.99
11	GFF5319		Type IV pilus biogenesis protein PilM	0.98	0.99
12	GFF5320		Type IV pilus biogenesis protein PilN	0.97	0.99
13	GFF2519		FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)	0.98	0.99
14	GFF3826		Response regulator receiver:LytTr DNA-binding region	0.94	0.99
15	GFF5322		Type IV pilus biogenesis protein PilP	0.98	0.99
16	GFF5416		Type IV fimbrial biogenesis protein PilW	0.93	0.98
17	GFF6075		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	0.98	0.98
18	GFF993		Type IV pilus biogenesis protein PilF	0.98	0.98
19	GFF3068		FIG00538108: hypothetical protein	0.98	0.98
20	GFF5415		Type IV fimbrial biogenesis protein PilV	0.98	0.98

Or look for negative cofitness