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Cofit
Protein
Homologs
Top cofit genes for GFF3299 from
Variovorax sp. SCN45
Pirin
SEED: Pirin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7374
FIG00984748: hypothetical protein
no
0.59
2
GFF4810
Ferrichrome-iron receptor
no
0.58
3
GFF3923
Kynurenine formamidase, bacterial (EC 3.5.1.9)
0.47
0.57
4
GFF4619
Altronate dehydratase (EC 4.2.1.7)
no
0.57
5
GFF7322
hypothetical protein
no
0.57
6
GFF5402
Transcriptional regulator, IclR family
no
0.56
7
GFF4069
DNA-binding heavy metal response regulator
no
0.56
8
GFF3456
Possible regulatory protein similar to urea ABC transporter, substrate binding protein
no
0.55
9
GFF6315
Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)
no
0.55
10
GFF3851
Uncharacterized MFS-type transporter
no
0.54
11
GFF5487
Thymidine phosphorylase (EC 2.4.2.4)
no
0.54
12
GFF6424
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
0.30
0.54
13
GFF4397
hypothetical protein
no
0.54
14
GFF4373
FIG131328: Predicted ATP-dependent endonuclease of the OLD family
no
0.53
15
GFF2683
Protein containing domains DUF404, DUF407
0.55
0.53
16
GFF6278
Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)
no
0.52
17
GFF274
Probable RNA methyltransferase PA1839
no
0.52
18
GFF2752
FIG00974677: hypothetical protein
no
0.52
19
GFF2369
putative 2-pyrone-4,6-dicarboxylic acid hydrolase
no
0.52
20
GFF3880
Cell division integral membrane protein, YggT and half-length relatives
no
0.51
Or look for
negative cofitness