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Cofit
Protein
Homologs
Top cofit genes for GFF3297 from
Variovorax sp. SCN45
hypothetical protein Ajs_0007
SEED: hypothetical protein Ajs_0007
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1874
4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
no
0.70
2
GFF6913
Ser-tRNA(Ala) deacylase @ Gly-tRNA(Ala) deacylase
no
0.67
3
GFF5016
ATP-dependent RNA helicase RhlE (EC 3.6.4.13)
no
0.65
4
GFF1990
Transcriptional regulator, MerR family
no
0.61
5
GFF3613
Protein of unknown function DUF55
no
0.59
6
GFF6570
hypothetical protein
no
0.58
7
GFF1019
monooxygenase, FAD-binding
no
0.55
8
GFF6251
hypothetical protein
no
0.55
9
GFF3292
hypothetical protein
no
0.55
10
GFF4635
Transketolase, N-terminal section (EC 2.2.1.1)
no
0.54
11
GFF3827
UPF0118 membrane protein SMc00793
no
0.54
12
GFF2282
Trans-feruloyl-CoA synthase (EC 6.2.1.34)
no
0.53
13
GFF7059
Zinc uptake regulation protein Zur
no
0.53
14
GFF6777
ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.53
15
GFF4215
L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ
no
0.53
16
GFF3013
KEGG: type VI secretion system secreted protein Hcp
no
0.53
17
GFF3298
Multimeric flavodoxin WrbA
no
0.52
18
GFF3495
ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.52
19
GFF5897
hypothetical protein
no
0.52
20
GFF3372
hypothetical protein
no
0.51
Or look for
negative cofitness