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  • Top cofit genes for GFF3295 from Variovorax sp. SCN45

    Endonuclease/exonuclease/phosphatase family protein
    SEED: Endonuclease/Exonuclease/phosphatase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2631 Transcriptional regulator, ArsR family no 0.61
    2 GFF5545 Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) no 0.57
    3 GFF3352 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.55
    4 GFF4846 Conjugative transfer protein TrbE no 0.54
    5 GFF4534 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like 0.34 0.52
    6 GFF1601 no description no 0.52
    7 GFF7025 hypothetical protein no 0.51
    8 GFF3401 P-hydroxylaminobenzoate lyase no 0.50
    9 GFF5184 no description no 0.50
    10 GFF6256 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37) no 0.50
    11 GFF6167 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.49
    12 GFF4326 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) no 0.49
    13 GFF6378 Nicotinamidase (EC 3.5.1.19) no 0.49
    14 GFF2689 Protein containing transglutaminase-like domain, putative cysteine protease 0.38 0.48
    15 GFF5626 Patatin no 0.47
    16 GFF4618 Hexuronate utilization operon transcriptional repressor ExuR 0.82 0.47
    17 GFF3647 Cytochrome b no 0.47
    18 GFF1918 hypothetical protein no 0.47
    19 GFF314 Acyltransferase no 0.46
    20 GFF5511 FIG000875: Thioredoxin domain-containing protein EC-YbbN no 0.46

    Or look for negative cofitness