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  • Top cofit genes for GFF3288 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7288 Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) 0.59 0.52
    2 GFF5587 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) no 0.51
    3 GFF3937 Transcriptional regulator, AraC family no 0.51
    4 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) no 0.51
    5 GFF5457 L-threonate dehydrogenase (NAD+) no 0.49
    6 GFF7189 dioxygenase, TauD/TfdA family no 0.48
    7 GFF5706 no description no 0.47
    8 GFF5000 PUTATIVE ZINC PROTEASE PROTEIN no 0.47
    9 GFF2593 Integral membrane protein no 0.45
    10 GFF4059 hypothetical protein no 0.45
    11 GFF2904 hypothetical protein no 0.45
    12 GFF3794 hypothetical protein no 0.45
    13 GFF2551 Endonuclease/exonuclease/phosphatase no 0.44
    14 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.44
    15 GFF6699 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.43
    16 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.43
    17 GFF602 Transcriptional regulator, LysR family => TcuR no 0.42
    18 GFF5402 Transcriptional regulator, IclR family no 0.42
    19 GFF3490 Putative amidase R03093 no 0.42
    20 GFF3476 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC no 0.42

    Or look for negative cofitness