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  • Top cofit genes for PS417_16785 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.25
    2 PS417_00625 taurine dioxygenase no 0.25
    3 PS417_19635 lipid kinase no 0.25
    4 PS417_19605 hypothetical protein no 0.24
    5 PS417_03195 LysR family transcriptional regulator no 0.23
    6 PS417_19805 flagellar M-ring protein FliF no 0.22
    7 PS417_20585 chemotaxis protein no 0.22
    8 PS417_17150 phosphonoacetaldehyde hydrolase no 0.21
    9 PS417_19615 chemotaxis protein CheW no 0.21
    10 PS417_15330 type VI secretion protein ImpA no 0.21
    11 PS417_15105 membrane protein no 0.21
    12 PS417_17010 AMP-binding protein no 0.21
    13 PS417_13480 serine protease no 0.21
    14 PS417_23700 aromatic amino acid transporter 0.60 0.21
    15 PS417_04930 hypothetical protein no 0.20
    16 PS417_10180 hypothetical protein no 0.20
    17 PS417_24410 ligand-gated channel no 0.20
    18 PS417_24275 diguanylate phosphodiesterase no 0.20
    19 PS417_23580 peptidylprolyl isomerase no 0.20
    20 PS417_07190 MFS transporter 0.63 0.19

    Or look for negative cofitness