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  • Top cofit genes for PS417_16780 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11840 GntR family transcriptional regulator no 0.24
    2 PS417_28370 cadmium ABC transporter ATPase no 0.23
    3 PS417_24155 ATP-binding protein no 0.22
    4 PS417_08040 hypothetical protein no 0.22
    5 PS417_18000 hypothetical protein no 0.21
    6 PS417_15995 peptidase no 0.21
    7 PS417_25325 mechanosensitive ion channel protein no 0.21
    8 PS417_21560 flagellar basal body rod modification protein FlgD no 0.20
    9 PS417_24175 hypothetical protein no 0.20
    10 PS417_19705 flagellar biosynthesis regulator FlhF no 0.20
    11 PS417_19735 flagellar biosynthesis protein FliQ 0.24 0.20
    12 PS417_09070 GntR family transcriptional regulator 0.22 0.20
    13 PS417_15855 universal stress protein no 0.20
    14 PS417_01440 hypothetical protein no 0.20
    15 PS417_25160 hypothetical protein no 0.20
    16 PS417_00880 hypothetical protein no 0.19
    17 PS417_00035 hypothetical protein no 0.19
    18 PS417_05015 homogentisate 1,2-dioxygenase 0.48 0.19
    19 PS417_10635 peptidylprolyl isomerase no 0.19
    20 PS417_09850 hypothetical protein no 0.19

    Or look for negative cofitness