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  • Top cofit genes for PS417_16775 from Pseudomonas simiae WCS417

    branched-chain amino acid ABC transporter ATP-binding protein
    SEED: ABC transporter ATP-binding protein
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19655 chemotaxis protein CheW no 0.26
    2 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 0.18 0.26
    3 PS417_19705 flagellar biosynthesis regulator FlhF 0.54 0.26
    4 PS417_18540 colicin V production CvpA no 0.26
    5 PS417_19730 flagellar biosynthesis protein FliR 0.13 0.26
    6 PS417_19645 chemotaxis protein no 0.26
    7 PS417_19675 chemotaxis protein CheY 0.26 0.26
    8 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.26
    9 PS417_19805 flagellar M-ring protein FliF 0.20 0.25
    10 PS417_19870 flagellar rod assembly protein FlgJ 0.13 0.25
    11 PS417_19800 flagellar motor switch protein FliG no 0.25
    12 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA 0.14 0.25
    13 PS417_19690 histidine kinase no 0.24
    14 PS417_19795 flagellar assembly protein FliH no 0.24
    15 PS417_19735 flagellar biosynthesis protein FliQ 0.13 0.24
    16 PS417_19660 cobalamin biosynthesis protein CobQ no 0.24
    17 PS417_18570 peptidoglycan-binding protein no 0.24
    18 PS417_05635 membrane protein no 0.24
    19 PS417_19695 flagellar biosynthesis sigma factor 0.14 0.24
    20 PS417_08825 TetR family transcriptional regulator 0.56 0.24

    Or look for negative cofitness