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  • Top cofit genes for GFF3260 from Variovorax sp. SCN45

    Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
    SEED: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2516 hypothetical protein no 0.59
    2 GFF5020 Tripartite tricarboxylate transporter TctB family no 0.51
    3 GFF5959 Putative amidase R03093 no 0.51
    4 GFF6172 Na(+) H(+) antiporter subunit C no 0.48
    5 GFF328 hypothetical protein no 0.48
    6 GFF4393 Uncharacterized ABC1 family protein XCC_1720 no 0.48
    7 GFF5298 FIG01204242: hypothetical protein no 0.46
    8 GFF3263 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family no 0.46
    9 GFF264 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.45
    10 GFF6901 no description no 0.44
    11 GFF3547 no description no 0.44
    12 GFF6794 hypothetical protein no 0.44
    13 GFF4446 FIG018171: hypothetical protein of Cupin superfamily no 0.44
    14 GFF3266 Putative transmembrane protein no 0.43
    15 GFF792 putative FecR no 0.43
    16 GFF4422 Conjugative transfer protein TrbG no 0.43
    17 GFF5714 no description no 0.43
    18 GFF5987 Response regulator BaeR no 0.42
    19 GFF4377 putative plasmid stabilization protein no 0.42
    20 GFF250 Homoserine/homoserine lactone efflux protein no 0.42

    Or look for negative cofitness