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  • Top cofit genes for GFF3244 from Variovorax sp. SCN45

    Spermidine synthase N-terminal extension / Spermidine synthase (EC 2.5.1.16)
    SEED: Spermidine synthase (EC 2.5.1.16)
    KEGG: spermidine synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6359 FIG01219766: hypothetical protein no 0.51
    2 GFF2454 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.50
    3 GFF6918 Transcriptional regulator, AraC family 0.33 0.49
    4 GFF1145 hypothetical protein no 0.48
    5 GFF2130 hypothetical protein no 0.48
    6 GFF1196 BUG/TctC family periplasmic protein no 0.47
    7 GFF4678 FIG00348290: hypothetical protein 0.24 0.47
    8 GFF3863 RNA polymerase sigma factor RpoE no 0.47
    9 GFF6298 Transcriptional regulator, LysR family no 0.46
    10 GFF4987 3-fumarylpyruvate hydrolase (EC 3.7.1.20) no 0.45
    11 GFF4913 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.43
    12 GFF2802 DUF1176 domain-containing protein no 0.43
    13 GFF1149 FIG110192: hypothetical protein no 0.43
    14 GFF1658 Transcriptional regulator, LysR family no 0.42
    15 GFF2384 no description no 0.42
    16 GFF5313 Protein-methionine-sulfoxide reductase catalytic subunit MsrP no 0.42
    17 GFF1570 Muconate cycloisomerase (EC 5.5.1.1) no 0.41
    18 GFF2758 Transcriptional regulator, RpiR family no 0.41
    19 GFF4151 RidA/YER057c/UK114 superfamily, group 1 no 0.41
    20 GFF2752 FIG00974677: hypothetical protein no 0.41

    Or look for negative cofitness