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  • Top cofit genes for GFF3240 from Hydrogenophaga sp. GW460-11-11-14-LB1

    Rod shape determination protein
    SEED: Rod shape determination protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF793 Tricarboxylate transport protein TctC no 0.31
    2 GFF4666 FOG: Ankyrin repeat no 0.31
    3 GFF1209 Probable transmembrane protein no 0.28
    4 GFF3811 COG0457: FOG: TPR repeat no 0.28
    5 GFF1567 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.28
    6 GFF4256 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) no 0.28
    7 GFF4801 hypothetical protein no 0.27
    8 GFF4015 hypothetical protein no 0.26
    9 GFF2419 Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) # Periplasmic precursor no 0.26
    10 GFF5627 Mannose-6-phosphate isomerase no 0.26
    11 GFF3505 FIG00443277: hypothetical protein no 0.25
    12 GFF5353 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 5 no 0.25
    13 GFF868 Metallo-beta-lactamase family protein no 0.25
    14 GFF3084 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) no 0.24
    15 GFF62 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) no 0.24
    16 GFF1986 hypothetical protein no 0.24
    17 GFF1225 FIG136845: Rhodanese-related sulfurtransferase no 0.24
    18 GFF3178 Death on curing protein, Doc toxin no 0.24
    19 GFF2878 Two-component response regulator no 0.24
    20 GFF1677 Peptidase, M23/M37 family no 0.24

    Or look for negative cofitness