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  • Top cofit genes for GFF3238 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6597 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF no 0.58
    2 GFF629 hypothetical protein no 0.56
    3 GFF4974 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.56
    4 GFF1632 RNA polymerase ECF-type sigma factor no 0.54
    5 GFF5239 hypothetical protein no 0.53
    6 GFF3203 no description no 0.53
    7 GFF378 RNA (nucleoside 2'-O)-methyltransferase no 0.52
    8 GFF115 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.52
    9 GFF6174 Fluoride ion transporter CrcB no 0.51
    10 GFF3145 Two-component system response regulator QseB no 0.51
    11 GFF218 hypothetical protein no 0.50
    12 GFF4156 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    13 GFF3720 Alternative dihydrofolate reductase 3 no 0.50
    14 GFF674 no description no 0.50
    15 GFF3433 hypothetical protein no 0.49
    16 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.48
    17 GFF1977 L-asparaginase (EC 3.5.1.1) no 0.48
    18 GFF3647 Cytochrome b no 0.48
    19 GFF940 Permease of the drug/metabolite transporter (DMT) superfamily no 0.48
    20 GFF5934 hypothetical protein no 0.47

    Or look for negative cofitness