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Cofit
Protein
Homologs
Top cofit genes for PS417_16555 from
Pseudomonas simiae WCS417
cupin
SEED: FIG002776: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_03260
5S ribosomal RNA
no
0.50
2
PS417
_19955
hypothetical protein
0.59
0.41
3
PS417
_24500
DEAD/DEAH box helicase
0.57
0.39
4
PS417
_21480
23S rRNA pseudouridylate synthase
0.78
0.37
5
PS417
_06680
nuclease PIN
no
0.36
6
PS417
_03560
GTP-binding protein
0.85
0.36
7
PS417
_27425
exopolyphosphatase
0.38
0.34
8
PS417
_20930
50S rRNA methyltransferase
0.79
0.33
9
PS417
_23915
pantoate--beta-alanine ligase
no
0.32
10
PS417
_19350
GTP cyclohydrolase
0.21
0.32
11
PS417
_26370
RNA helicase
0.49
0.32
12
PS417
_16390
peroxiredoxin
no
0.31
13
PS417
_28050
hypothetical protein
0.62
0.31
14
PS417
_15800
photosynthetic protein synthase I
no
0.30
15
PS417
_23370
protoheme IX farnesyltransferase
0.40
0.30
16
PS417
_23390
ubiquinol oxidase subunit II
0.40
0.29
17
PS417
_02975
3-dehydroquinate dehydratase
no
0.29
18
PS417
_24600
hydrogenase
no
0.29
19
PS417
_23380
cytochrome o ubiquinol oxidase subunit III
0.44
0.28
20
PS417
_04290
hypothetical protein
0.58
0.28
Or look for
negative cofitness