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  • Top cofit genes for GFF3229 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3446 Quinone oxidoreductase (EC 1.6.5.5) no 0.59
    2 GFF2719 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.58
    3 GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent no 0.58
    4 GFF3052 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) no 0.57
    5 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.57
    6 GFF363 Transcriptional regulator, Crp/Fnr family no 0.56
    7 GFF3359 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family no 0.56
    8 GFF4560 hypothetical protein no 0.56
    9 GFF3053 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) no 0.55
    10 GFF6107 Zinc transporter, ZIP family no 0.55
    11 GFF2091 Cobalt/zinc/cadmium resistance protein CzcD no 0.54
    12 GFF1202 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) no 0.54
    13 GFF4821 Transcriptional regulator, AcrR family no 0.53
    14 GFF5640 Putative formate dehydrogenase oxidoreductase protein no 0.53
    15 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.53
    16 GFF1857 FIG00553873: hypothetical protein no 0.53
    17 GFF769 Conserved TM helix no 0.53
    18 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX no 0.53
    19 GFF7016 FAD-dependent oxidoreductase no 0.53
    20 GFF891 Gfa-like protein no 0.53

    Or look for negative cofitness