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  • Top cofit genes for PS417_16525 from Pseudomonas simiae WCS417

    isocitrate dehydrogenase
    SEED: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
    KEGG: isocitrate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25960 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) 0.40 0.38
    2 PS417_00710 fusaric acid resistance protein 0.45 0.37
    3 PS417_19965 histidine kinase 0.74 0.35
    4 PS417_00715 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) (from data) 0.53 0.34
    5 PS417_21010 ribonuclease activity regulator protein RraA 0.28 0.34
    6 PS417_00720 membrane protein 0.43 0.33
    7 PS417_21750 acetyl-CoA synthetase 0.74 0.33
    8 PS417_09210 TetR family transcriptional regulator no 0.33
    9 PS417_05840 LuxR family transcriptional regulator 0.22 0.32
    10 PS417_01710 histidine utilization repressor 0.36 0.32
    11 PS417_17505 LuxR family transcriptional regulator 0.33 0.31
    12 PS417_24805 Fis family transcriptional regulator 0.66 0.30
    13 PS417_01265 CbbBc protein no 0.29
    14 PS417_00725 RND transporter no 0.29
    15 PS417_24810 aldehyde dehydrogenase 0.74 0.29
    16 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.37 0.28
    17 PS417_00335 cytochrome B561 0.28 0.28
    18 PS417_17420 ethanol oxidation regulatory protein ercA (from data) no 0.27
    19 PS417_24835 hypothetical protein no 0.27
    20 PS417_14005 4-hydroxyphenylpyruvate dioxygenase 0.32 0.27

    Or look for negative cofitness