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  • Top cofit genes for PS417_16520 from Pseudomonas simiae WCS417

    cold-shock protein
    SEED: Cold shock protein CspD
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04080 peptide ABC transporter substrate-binding protein no 0.25
    2 PS417_25790 aminoglycoside phosphotransferase no 0.22
    3 PS417_28450 XRE family transcriptional regulator 0.37 0.22
    4 PS417_21420 aminodeoxychorismate lyase 0.36 0.22
    5 PS417_14920 CoA-transferase no 0.21
    6 PS417_25840 SpoVR family protein 0.21 0.21
    7 PS417_18825 TetR family transcriptional regulator no 0.21
    8 PS417_22815 permease no 0.20
    9 PS417_00335 cytochrome B561 no 0.20
    10 PS417_14675 aldehyde dehydrogenase no 0.20
    11 PS417_16375 2-hydroxyacid dehydrogenase no 0.20
    12 PS417_05400 hypothetical protein no 0.20
    13 PS417_24835 hypothetical protein no 0.20
    14 PS417_12730 glycosyltransferase 0.58 0.20
    15 PS417_13495 nuclease no 0.20
    16 PS417_09195 glutathione S-transferase no 0.19
    17 PS417_13295 TetR family transcriptional regulator no 0.19
    18 PS417_10460 selenide, water dikinase 0.43 0.19
    19 PS417_16510 Clp protease ClpX 0.37 0.19
    20 PS417_07110 hypothetical protein no 0.19

    Or look for negative cofitness