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  • Top cofit genes for GFF3226 from Sphingobium sp. HT1-2

    Serine recombinase, PinQ/PinR-type
    KEGG: putative DNA-invertase from lambdoid prophage Rac

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1660 NADP-dependent malic enzyme (EC 1.1.1.40) 0.44 0.83
    2 GFF2283 Quinone oxidoreductase (EC 1.6.5.5) no 0.82
    3 GFF3760 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit no 0.81
    4 GFF4142 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.80
    5 GFF3818 Phosphocarrier protein, nitrogen regulation associated no 0.80
    6 GFF1150 tRNA-dihydrouridine synthase DusB no 0.80
    7 GFF784 Nitrogen regulatory protein P-II, GlnK no 0.80
    8 GFF2768 hypothetical protein no 0.80
    9 GFF3758 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) no 0.79
    10 GFF91 Lytic murein transglycosylase no 0.78
    11 GFF776 RNA polymerase sigma-54 factor RpoN no 0.78
    12 GFF2791 Two-component system sensor histidine kinase no 0.78
    13 GFF785 Ammonium transporter no 0.78
    14 GFF4046 anti-FecI sigma factor FecR no 0.78
    15 GFF4205 Ubiquinol-cytochrome C chaperone no 0.78
    16 GFF2766 Cytochrome c precursor no 0.77
    17 GFF2007 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated no 0.77
    18 GFF1148 Nitrogen regulation protein NR(I), GlnG (=NtrC) 0.47 0.77
    19 GFF4767 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) no 0.76
    20 GFF2599 Quinohemoprotein amine dehydrogenase alpha subunit (EC 1.4.99.-) no 0.75

    Or look for negative cofitness