Top cofit genes for GFF322 from Hydrogenophaga sp. GW460-11-11-14-LB1

Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)
SEED: Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)

Rank Hit Name Description Conserved? Cofitness  
1 GFF2937 D-alanine aminotransferase (EC 2.6.1.21) no 0.54
2 GFF4857 GTP-binding protein HflX no 0.45
3 GFF397 Acyl-CoA-binding protein no 0.44
4 GFF3731 FIG00956224: hypothetical protein no 0.43
5 GFF886 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) no 0.43
6 GFF2049 Permeases of the major facilitator superfamily no 0.42
7 GFF505 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) no 0.42
8 GFF4421 L-carnitine dehydratase/bile acid-inducible protein F no 0.42
9 GFF41 hypothetical protein no 0.41
10 GFF3536 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.41
11 GFF873 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) no 0.40
12 GFF4978 Homoserine kinase (EC 2.7.1.39) no 0.40
13 GFF3008 FIG025233: SAM-dependent methyltransferases no 0.39
14 GFF795 TRAP-type C4-dicarboxylate transport system, large permease component no 0.39
15 GFF1652 similar to protocatechuate 4,5-dioxygenase beta chain no 0.38
16 GFF2652 Transcriptional regulator, MarR family no 0.38
17 GFF5628 Transcriptional regulator, LysR family no 0.38
18 GFF935 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.38
19 GFF799 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.38
20 GFF4182 Conjugative transfer protein TrbL no 0.37

Or look for negative cofitness