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  • Top cofit genes for GFF3218 from Variovorax sp. SCN45

    Phage tail fiber

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2482 Urease accessory protein UreE no 0.60
    2 GFF3384 Transcriptional regulator, Crp/Fnr family no 0.56
    3 GFF6008 Citrate synthase (si) (EC 2.3.3.1) no 0.56
    4 GFF7242 hypothetical protein no 0.56
    5 GFF1375 Transcriptional regulator, LysR family no 0.56
    6 GFF3001 Metal chaperone, involved in Zn homeostasis no 0.54
    7 GFF1791 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.51
    8 GFF6334 no description no 0.51
    9 GFF5466 NAD(P)H oxidoreductase YrkL @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 no 0.51
    10 GFF6641 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.51
    11 GFF4871 FIG00457034: hypothetical protein no 0.51
    12 GFF4967 Glutathione S-transferase family protein no 0.51
    13 GFF3786 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.50
    14 GFF5506 Transcriptional regulator Bmul_5214, AsnC family no 0.48
    15 GFF1729 HIPA PROTEIN no 0.48
    16 GFF6076 Spermidine synthase-like protein no 0.48
    17 GFF4218 no description no 0.48
    18 GFF5099 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52) no 0.47
    19 GFF3374 no description no 0.47
    20 GFF1503 Dihydrofolate reductase homolog no 0.47

    Or look for negative cofitness