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  • Top cofit genes for GFF3216 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6545 Uncharacterized MFS-type transporter no 0.59
    2 GFF7158 Pirin no 0.55
    3 GFF4037 CzcABC family efflux RND transporter, transmembrane protein no 0.54
    4 GFF4150 Salicylate hydroxylase (EC 1.14.13.1) no 0.54
    5 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.53
    6 GFF2897 Glutathione S-transferase-like( EC:2.5.1.18 ) no 0.53
    7 GFF1055 Fumarylacetoacetate hydrolase family protein no 0.51
    8 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) no 0.51
    9 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.51
    10 GFF5682 TRAP-type transport system, periplasmic component no 0.51
    11 GFF4185 RNA polymerase ECF-type sigma factor no 0.50
    12 GFF6878 hypothetical protein no 0.50
    13 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.50
    14 GFF1907 Transcriptional regulator, AraC family no 0.49
    15 GFF6800 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.49
    16 GFF2948 salicylate esterase no 0.48
    17 GFF48 DNA double-strand break repair protein Mre11 no 0.48
    18 GFF6875 hypothetical protein no 0.48
    19 GFF7161 Transcriptional regulator, LysR family no 0.48
    20 GFF1128 Alkyl hydroperoxide reductase subunit C-like protein no 0.48

    Or look for negative cofitness