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  • Top cofit genes for GFF3210 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5275 Various polyols ABC transporter, ATP-binding protein no 0.53
    2 GFF3589 Transcriptional regulator, LysR family no 0.52
    3 GFF6368 T6SS lysozyme-like component TssE no 0.50
    4 GFF5046 putative lipoprotein no 0.50
    5 GFF6350 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.49
    6 GFF5047 hypothetical protein no 0.48
    7 GFF5107 Transcriptional regulator, LysR family no 0.47
    8 GFF6594 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.46
    9 GFF2258 4-hydroxybenzoate transporter no 0.46
    10 GFF6754 no description no 0.45
    11 GFF1344 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.44
    12 GFF3429 Transcriptional regulator, AraC family no 0.44
    13 GFF3058 Demethylmenaquinone methyltransferase-like protein no 0.44
    14 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system no 0.43
    15 GFF3672 no description no 0.42
    16 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.42
    17 GFF6352 T6SS component TssM (IcmF/VasK) no 0.42
    18 GFF2783 Transcriptional regulator, LysR family no 0.41
    19 GFF4313 2-dehydropantoate 2-reductase (EC 1.1.1.169) no 0.41
    20 GFF1526 putative transmembrane sensor no 0.41

    Or look for negative cofitness