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  • Top cofit genes for GFF3208 from Variovorax sp. SCN45

    Transposon Tn7 transposition protein tnsB
    SEED: Transposon Tn7 transposition protein tnsB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4065 Uncharacterized cysteine-rich DUF326 protein bsYhjQ/STM1261 no 0.55
    2 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) no 0.46
    3 GFF5301 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.45
    4 GFF2476 Tripartite tricarboxylate transporter TctB family no 0.45
    5 GFF3085 no description no 0.44
    6 GFF4134 Small molecule metabolism no 0.44
    7 GFF6330 BUG/TctC family periplasmic protein no 0.44
    8 GFF2191 Pca operon transcriptional activator PcaQ no 0.44
    9 GFF2222 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.43
    10 GFF3192 hypothetical protein no 0.43
    11 GFF42 hypothetical protein no 0.42
    12 GFF7136 hypothetical protein no 0.42
    13 GFF2143 probable membrane protein YPO3302 no 0.41
    14 GFF2184 VWA containing CoxE family protein no 0.41
    15 GFF89 hypothetical protein no 0.41
    16 GFF485 hypothetical protein no 0.41
    17 GFF2086 hypothetical protein no 0.40
    18 GFF3219 hypothetical protein no 0.40
    19 GFF3301 Lignostilbene-alpha,beta-dioxygenase and related enzymes no 0.40
    20 GFF699 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.40

    Or look for negative cofitness