Top cofit genes for GFF320 from Variovorax sp. SCN45

RNA polymerase ECF-type sigma factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank Hit Name Description Conserved? Cofitness  
1 GFF786 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.57
2 GFF4003 FIGfam005179 no 0.56
3 GFF4491 no description no 0.54
4 GFF4604 TesB-like acyl-CoA thioesterase 2 no 0.54
5 GFF6947 transcriptional regulator, Crp/Fnr family 0.97 0.53
6 GFF3494 hypothetical protein no 0.53
7 GFF2416 Transcriptional regulator YbhD, LysR family no 0.53
8 GFF5475 Uncharacterized MFS-type transporter no 0.53
9 GFF485 hypothetical protein no 0.52
10 GFF2680 Protein of unknown function DUF1058 0.28 0.52
11 GFF1918 hypothetical protein no 0.52
12 GFF4111 ABC-type amino acid transport/signal transduction system, periplasmic component/domain no 0.51
13 GFF4717 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) 0.27 0.51
14 GFF2902 ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) no 0.51
15 GFF875 no description no 0.50
16 GFF2669 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) no 0.50
17 GFF2232 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) 0.23 0.50
18 GFF2606 Tripartite tricarboxylate transporter TctC family no 0.50
19 GFF5696 Hemoglobin-like protein HbO no 0.48
20 GFF6630 hypothetical protein no 0.48

Or look for negative cofitness