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  • Top cofit genes for GFF3194 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1777 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.53
    2 GFF3904 Probable signal peptide protein no 0.52
    3 GFF5780 Positive regulator of L-idonate catabolism no 0.52
    4 GFF7245 universal stress protein, UspA family no 0.52
    5 GFF4806 Arsenate reductase (EC 1.20.4.1) glutaredoxin-coupled, glutaredoxin-like family no 0.51
    6 GFF1365 no description no 0.50
    7 GFF2936 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.49
    8 GFF593 tRNA (guanine(46)-N(7))-methyltransferase (EC 2.1.1.33) no 0.49
    9 GFF1064 Transcriptional regulator, GntR family no 0.48
    10 GFF4099 Ser/Thr protein phosphatase family protein no 0.48
    11 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein no 0.47
    12 GFF4232 no description no 0.47
    13 GFF5701 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) no 0.47
    14 GFF6682 Efflux ABC transporter, permease protein no 0.47
    15 GFF2562 UPF0391 membrane protein RGE_28580 no 0.46
    16 GFF4774 Broad-specificity amino acid ABC transporter, ATP-binding protein 2 no 0.46
    17 GFF4781 AttH component of AttEFGH ABC transport system no 0.46
    18 GFF1858 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.45
    19 GFF2331 Tautomerase / Tautomerase no 0.45
    20 GFF5788 FIG004556: membrane metalloprotease no 0.45

    Or look for negative cofitness