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Cofit
Protein
Homologs
Top cofit genes for GFF3188 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5010
Geranyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.5)
no
0.48
2
GFF4510
hypothetical protein
no
0.48
3
GFF509
ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.47
4
GFF6355
T6SS secretion lipoprotein TssJ (VasD)
no
0.46
5
GFF1686
Uncharacterized protein Bsu YraM
no
0.46
6
GFF5221
Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
no
0.45
7
GFF5180
NADH:flavin oxidoreductases, Old Yellow Enzyme family
no
0.42
8
GFF4331
Oxidoreductase, GMC family
no
0.42
9
GFF5700
UPF0758 family protein
no
0.41
10
GFF620
Transcriptional regulator, LysR family
no
0.41
11
GFF2969
acyl-CoA synthetase (NDP forming type)
no
0.41
12
GFF3725
RND efflux system, inner membrane transporter
no
0.41
13
GFF1661
no description
no
0.41
14
GFF4641
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.41
15
GFF694
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
no
0.40
16
GFF6001
Purine nucleoside permease
no
0.40
17
GFF1920
Cysteine dioxygenase (EC 1.13.11.20)
no
0.40
18
GFF4578
Electron transfer flavoprotein, alpha subunit
no
0.40
19
GFF7201
Alkanesulfonates transport system permease protein
no
0.39
20
GFF2480
Urease accessory protein UreG
no
0.39
Or look for
negative cofitness