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  • Top cofit genes for GFF3188 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5010 Geranyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.5) no 0.48
    2 GFF4510 hypothetical protein no 0.48
    3 GFF509 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    4 GFF6355 T6SS secretion lipoprotein TssJ (VasD) no 0.46
    5 GFF1686 Uncharacterized protein Bsu YraM no 0.46
    6 GFF5221 Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) no 0.45
    7 GFF5180 NADH:flavin oxidoreductases, Old Yellow Enzyme family no 0.42
    8 GFF4331 Oxidoreductase, GMC family no 0.42
    9 GFF5700 UPF0758 family protein no 0.41
    10 GFF620 Transcriptional regulator, LysR family no 0.41
    11 GFF2969 acyl-CoA synthetase (NDP forming type) no 0.41
    12 GFF3725 RND efflux system, inner membrane transporter no 0.41
    13 GFF1661 no description no 0.41
    14 GFF4641 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.41
    15 GFF694 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) no 0.40
    16 GFF6001 Purine nucleoside permease no 0.40
    17 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.40
    18 GFF4578 Electron transfer flavoprotein, alpha subunit no 0.40
    19 GFF7201 Alkanesulfonates transport system permease protein no 0.39
    20 GFF2480 Urease accessory protein UreG no 0.39

    Or look for negative cofitness