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  • Top cofit genes for GFF3185 from Variovorax sp. SCN45

    SAM-dependent methyltransferase
    SEED: ubiquinone/menaquinone biosynthesis methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5492 Putative transmembrane lipoprotein no 0.49
    2 GFF3093 FIG138056: a glutathione-dependent thiol reductase no 0.49
    3 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) no 0.49
    4 GFF1078 hypothetical protein no 0.47
    5 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.46
    6 GFF4517 Uncharacterized MFS-type transporter YtbD no 0.46
    7 GFF122 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) no 0.44
    8 GFF6321 Ferrichrome-iron receptor no 0.44
    9 GFF6905 Chloride channel protein 0.18 0.44
    10 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.43
    11 GFF1473 Amidase family protein BBta_1912 no 0.43
    12 GFF3375 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.43
    13 GFF4874 Plasmid replication initiator protein no 0.42
    14 GFF1124 no description no 0.42
    15 GFF4503 RNA polymerase sigma factor no 0.42
    16 GFF2007 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) no 0.42
    17 GFF4964 Sulfate permease no 0.41
    18 GFF1268 FIG022199: FAD-binding protein 0.37 0.41
    19 GFF3833 FIG01056426: hypothetical protein no 0.41
    20 GFF2768 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16) no 0.41

    Or look for negative cofitness