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  • Top cofit genes for GFF3176 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, LuxR family
    SEED: Two-component response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4181 hypothetical protein no 0.50
    2 GFF2654 Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydC subunit no 0.48
    3 GFF5247 hypothetical protein no 0.48
    4 GFF4997 hypothetical protein no 0.47
    5 GFF2334 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.47
    6 GFF5917 T6SS component TssB (ImpB/VipA) no 0.47
    7 GFF2757 hypothetical protein no 0.47
    8 GFF264 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.46
    9 GFF3057 Aspartate aminotransferase (EC 2.6.1.1) no 0.45
    10 GFF2780 Phosphoesterase, PA-phosphatase related no 0.45
    11 GFF6441 hypothetical protein no 0.45
    12 GFF7393 Mobile element protein no 0.45
    13 GFF808 Polyhydroxyalkanoic acid synthase no 0.45
    14 GFF5016 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.45
    15 GFF5354 C4-dicarboxylate transport protein no 0.43
    16 GFF6619 hypothetical protein no 0.43
    17 GFF6473 hypothetical protein no 0.43
    18 GFF5360 Putative transmembrane protein no 0.43
    19 GFF4870 Glycosidases no 0.43
    20 GFF7365 no description no 0.43

    Or look for negative cofitness